miRBase entry: mmu-mir-5620

Stem-loop mmu-mir-5620


Accession
MI0019188
Symbol
MGI: Mir5620
Description
Mus musculus mmu-mir-5620 precursor miRNA

Literature search
1 open access papers mention mmu-mir-5620
(3 sentences)

Sequence

479 reads, 17 reads per million, 71 experiments
ACGAGGCAGGGGCUUUGACUGUGacaaaaucacucACAGUCAUCCCCCUGCCUCAC
..((((((((((...(((((((((.........)))))))))..))))))))))..

Structure
AC          CUU         caa 
  GAGGCAGGGG   UGACUGUGa   a
  ||||||||||   |||||||||   a
  CUCCGUCCCC   ACUGACAcu   u
CA          -CU         cac 


Annotation confidence Not enough data
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Genome context
chr7: 7298891-7298946 [+]

Database links

Mature mmu-miR-5620-5p

Accession MIMAT0022367
Description Mus musculus mmu-miR-5620-5p mature miRNA
Sequence 1 - ACGAGGCAGGGGCUUUGACUGUG - 23
Evidence not_experimental
Database links
Predicted targets

Mature mmu-miR-5620-3p

Accession MIMAT0022368
Description Mus musculus mmu-miR-5620-3p mature miRNA
Sequence 36 - ACAGUCAUCCCCCUGCCUCAC - 56
Evidence not_experimental

References

  1. PubMed ID: 21911355
    miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades
    "Friedlander MR, Mackowiak SD, Li N, Chen W, Rajewsky N"
    "Nucleic Acids Res (2012) 40:37-52