miRBase entry: hsa-mir-5583-1

Stem-loop hsa-mir-5583-1


Accession
MI0019139
Symbol
HGNC: MIR5583-1
Description
Homo sapiens hsa-mir-5583-1 precursor miRNA
Gene family
MIPF0001356; mir-5583


Sequence

399 reads, 21 reads per million, 16 experiments
AAACUAAUAUACCCAUAUUCUGgcuaggugaucaucaGAAUAUGGGUAUAUUAGUUUGG
(((((((((((((((((((((((...........)))))))))))))))))))))))..

Structure
--                       cuag 
  AAACUAAUAUACCCAUAUUCUGg    g
  |||||||||||||||||||||||    u
  UUUGAUUAUAUGGGUAUAAGacu    g
GG                       acua 


Annotation confidence High
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Genome context
chr18: 39676721-39676779 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from hsa-mir-5583-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature hsa-miR-5583-5p

Accession MIMAT0022281
Description Homo sapiens hsa-miR-5583-5p mature miRNA
Sequence 1 - AAACUAAUAUACCCAUAUUCUG - 22
Evidence not_experimental

Mature hsa-miR-5583-3p

Accession MIMAT0022282
Description Homo sapiens hsa-miR-5583-3p mature miRNA
Sequence 38 - GAAUAUGGGUAUAUUAGUUUGG - 59
Evidence not_experimental

References

  1. PubMed ID: 21911355
    miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades
    "Friedlander MR, Mackowiak SD, Li N, Chen W, Rajewsky N"
    "Nucleic Acids Res (2012) 40:37-52