miRBase entry: sbi-MIR5565a

Stem-loop sbi-MIR5565a


Accession
MI0019107
Description
Sorghum bicolor sbi-MIR5565a precursor miRNA
Gene family
MIPF0001279; MIR5565


Sequence

guagucggauccgcaucaaucuacauguguuggaguggauuggaguagaaauugaauuaaauuucaccucaauccacuccAACACAUGUGGAUUGAGGCGAAUCcgaca
...(((((((.(((.((((((((((((((((((((((((((((.((.((((((......)))))))).)))))))))))))))))))))))))))).))).))))))).

Structure
gua       c   a                            a  a      ga 
   gucggau cgc ucaaucuacauguguuggaguggauugg gu gaaauu  a
   ||||||| ||| |||||||||||||||||||||||||||| || ||||||   
   cagcCUA GCG AGUUAGGUGUACACAAccucaccuaacu ca cuuuaa  u
--a       A   G                            c  -      au 


Annotation confidence Not enough data
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Genome context
chr4: 9312555-9312663 [+]

Database links

Mature sbi-miR5565a

Accession MIMAT0022252
Description Sorghum bicolor sbi-miR5565a mature miRNA
Sequence 81 - AACACAUGUGGAUUGAGGCGAAUC - 104
Evidence experimental
454 [1]

References

  1. PubMed ID: 21907786
    Identification and temporal expression analysis of conserved and novel microRNAs in Sorghum
    "Zhang L, Zheng Y, Jagadeeswaran G, Li Y, Gowdu K, Sunkar R"
    "Genomics (2011) 98:460-468