miRBase entry: sbi-MIR5387b

Stem-loop sbi-MIR5387b


Accession
MI0019104
Description
Sorghum bicolor sbi-MIR5387b precursor miRNA
Gene family
MIPF0001305; MIR5387

Literature search
1 open access papers mention sbi-MIR5387b
(1 sentences)

Sequence

cggcaCGUGGCUCUGACCGGUGCUAAAGGgucucugccccaacaacaccugucaguagccguggggcaggauccuuuagcaccgguucguguuacgaaccgguguuaaa
(((..((((((.(.((((((((((((((((((.((((((((.....((......)).....)))))))))))))))))))))))))).).))))))..)))........

Structure
--------   ca      U U                  u        acaac  cu 
        cgg  CGUGGC C GACCGGUGCUAAAGGguc cugcccca     ac  g
        |||  |||||| | |||||||||||||||||| ||||||||     ||   
        gcc  gcauug g uuggccacgauuuccuag gacggggu     ug  u
aaauugug   aa      u c                  -        gccga  ac 


Annotation confidence Not enough data
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Genome context
chr6: 55683234-55683342 [+]

Database links

Mature sbi-miR5387b

Accession MIMAT0022249
Description Sorghum bicolor sbi-miR5387b mature miRNA
Sequence 6 - CGUGGCUCUGACCGGUGCUAAAGG - 29
Evidence experimental
454 [1]

References

  1. PubMed ID: 21907786
    Identification and temporal expression analysis of conserved and novel microRNAs in Sorghum
    "Zhang L, Zheng Y, Jagadeeswaran G, Li Y, Gowdu K, Sunkar R"
    "Genomics (2011) 98:460-468