miRBase entry: sbi-MIR5566

Stem-loop sbi-MIR5566


Accession
MI0019100
Description
Sorghum bicolor sbi-MIR5566 precursor miRNA

Literature search
1 open access papers mention sbi-MIR5566
(2 sentences)

Sequence

gaguuUCAGCAUCACCUCCCUGUUGUucuccggguacacaaccuccccgucgagacguguauuuggagaacagcggggaggugcugccgaaauuucgucucagauc
(((((((.(((.(((((((((((((((((((((((((((...(((......)))..))))))))))))))))))))))))))).))).)))))))...........

Structure
-----------       A   U                           aac   cc 
           gaguuUC GCA CACCUCCCUGUUGUucuccggguacac   cuc  c
           ||||||| ||| |||||||||||||||||||||||||||   |||   
           uuuaaag cgu guggaggggcgacaagagguuuaugug   gag  g
cuagacucugc       c   c                           -ca   cu 


Annotation confidence Not enough data
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Genome context
chr2: 6668230-6668335 [+]

Database links

Mature sbi-miR5566

Accession MIMAT0022245
Description Sorghum bicolor sbi-miR5566 mature miRNA
Sequence 6 - UCAGCAUCACCUCCCUGUUGU - 26
Evidence experimental
454 [1]

References

  1. PubMed ID: 21907786
    Identification and temporal expression analysis of conserved and novel microRNAs in Sorghum
    "Zhang L, Zheng Y, Jagadeeswaran G, Li Y, Gowdu K, Sunkar R"
    "Genomics (2011) 98:460-468