miRBase entry: mtr-MIR2111a

Stem-loop mtr-MIR2111a


Accession
MI0019095
Description
Medicago truncatula mtr-MIR2111a precursor miRNA
Gene family
MIPF0000754; MIR2111

Literature search
2 open access papers mention mtr-MIR2111a
(8 sentences)

Sequence

uauauugggaucagaugagaUAAUCUGCAUCCUGAGGUUUAgaacaaccgaugcgucacugugucuaAGCCUUGGAAUGCAGAUUAUCucuuccuuaucaccaaugca
..(((((((((..((.((((((((((((((.(((((((((((((((.............))).)))))))))))).)))))))))))))).))...))).))))))..

Structure
ua      -   -ca  u              C            -   accga 
  uauugg gau   ga gagaUAAUCUGCAU CUGAGGUUUAga aca     u
  |||||| |||   || |||||||||||||| |||||||||||| |||     g
  guaacc cua   cu cuCUAUUAGACGUA GGUUCCGAaucu ugu     c
ac      a   uuc  u              A            g   cacug 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature mtr-miR2111a-5p

Accession MIMAT0022239
Description Medicago truncatula mtr-miR2111a-5p mature miRNA
Sequence 21 - UAAUCUGCAUCCUGAGGUUUA - 41
Evidence experimental
Illumina [1]

Mature mtr-miR2111a-3p

Accession MIMAT0022240
Description Medicago truncatula mtr-miR2111a-3p mature miRNA
Sequence 68 - AGCCUUGGAAUGCAGAUUAUC - 88
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21762498
    Identification of drought-responsive microRNAs in Medicago truncatula by genome-wide high-throughput sequencing
    Wang T, Chen L, Zhao M, Tian Q, Zhang WH
    BMC Genomics (2011) 12:367