Stem-loop sequence osa-MIR5511

Accession

MI0019029 (change log)

Description

Oryza sativa miR5511 stem-loop

Literature search

1 open access papers mention osa-MIR5511
(1 sentences)

Stem-loop

   uug ug aag      -  gu u         uggaaauaacuuccuagcuggcuggccuaaga 
5'    g  g   aaggcc aa  g uugggaugu                                a
      |  |   |||||| ||  | |||||||||                                a
3'    c  c   uuccgg uu  u gacccuaua                                u
   uua gu --g      c  ug c         cguaccaaacuuugccgagaaacagauacuuu 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (MSU7): Chr4: 14653011-14653138 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0019029

Mature sequence osa-miR5511

• Accession: MIMAT0022144
• Sequence: 98 - cauaucccagcuguuucggcc - 118
• Evidence: experimental; Illumina [1]

References

1. PMID:21679406 "Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa" Wei LQ, Yan LF, Wang T Genome Biol. 12:R53(2011).