Stem-loop aca-mir-5460

Accession

MI0018966

Description

Anolis carolinensis aca-mir-5460 precursor miRNA

Sequence

cauggacaggaagccacugagccuuuccagucauggagagugacacucaaaUGACUGAAAAGGCUCAGUGGCuucuuguccuug
((.(((((((((((((((((((((((.(((((((...((((...))))..))))))).))))))))))))))))))))))).))

Structure

  u                       c       gga    g 
ca ggacaggaagccacugagccuuu cagucau   gagu  
|| ||||||||||||||||||||||| |||||||   |||| a
gu ccuguucuuCGGUGACUCGGAAA GUCAGUa   cuca  
  u                       A       -aa    c 

Annotation confidence Not enough data

Genome context

chr2: 114117441-114117524 [+]

Mature aca-miR-5460

• Accession: MIMAT0022088
• Description: Anolis carolinensis aca-miR-5460 mature miRNA
• Sequence: 52 - UGACUGAAAAGGCUCAGUGGC - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107