miRBase entry: aca-mir-5458

Stem-loop aca-mir-5458


Accession
MI0018963
Description
Anolis carolinensis aca-mir-5458 precursor miRNA


Sequence

cgaggcuuucaagGGAUCCACGGGGAUGCUGAGCuuugucuuuccuaaaccucagcauccguauggauucauuggaaguccca
.(.(((((((((.(((((((.(.((((((((((.((((.......)))).)))))))))).).))))))).))))))))).).

Structure
c a         g       C G          C    uc 
 g ggcuuucaa GGAUCCA G GGAUGCUGAG uuug  u
 | ||||||||| ||||||| | |||||||||| ||||  u
 c cugaagguu cuuaggu u ccuacgacuc aaau  u
a c         a       a g          c    cc 


Annotation confidence Not enough data
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Genome context
GL343999.1: 30681-30763 [+]

Database links

Mature aca-miR-5458

Accession MIMAT0022085
Description Anolis carolinensis aca-miR-5458 mature miRNA
Sequence 14 - GGAUCCACGGGGAUGCUGAGC - 34
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107