miRBase entry: aca-mir-5455

Stem-loop aca-mir-5455


Accession
MI0018960
Description
Anolis carolinensis aca-mir-5455 precursor miRNA


Sequence

ugcuuguacaggguauUUGAAAAAGAAGUCCCUAGUUCccauuaauuuauacuuaaaacuaggGAGUUCUUUUUCAAACACCCUGuauaaaaa
...(((((((((((.((((((((((((.(((((((((...................))))))))).)))))))))))).)))))))))))...

Structure
ugc           a            G         Cccauuaa 
   uuguacagggu uUUGAAAAAGAA UCCCUAGUU        u
   ||||||||||| |||||||||||| |||||||||        u
   aauauGUCCCA AAACUUUUUCUU AGggaucaa        u
aaa           C            G         aauucaua 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr1: 3181257-3181349 [-]

Database links

Mature aca-miR-5455-5p

Accession MIMAT0022081
Description Anolis carolinensis aca-miR-5455-5p mature miRNA
Sequence 17 - UUGAAAAAGAAGUCCCUAGUUC - 38
Evidence experimental
Illumina [1]

Mature aca-miR-5455-3p

Accession MIMAT0022082
Description Anolis carolinensis aca-miR-5455-3p mature miRNA
Sequence 64 - GAGUUCUUUUUCAAACACCCUG - 85
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107