Stem-loop aca-mir-5453

Accession

MI0018958

Description

Anolis carolinensis aca-mir-5453 precursor miRNA

Sequence

aaauggggucacacugcauucauuccaguguagaugcacucauuguuuguaucAUCCCCACUGCAGAAUGAAUGcaggguggcccuacuu
...(((((((((.(((((((((((((((((..((((....((.....))...))))..)))))..)))))))))))).)))))))))...

Structure

aaa         a            --     ua    cacu  u 
   uggggucac cugcauucauuc  cagug  gaug    ca u
   ||||||||| ||||||||||||  |||||  ||||    || g
   aucccggug gacGUAAGUAAG  GUCAC  CUAc    gu u
uuc         g            AC     CC    -uau  u 

Annotation confidence Not enough data

Genome context

chr5: 17342530-17342619 [+]

Mature aca-miR-5453

• Accession: MIMAT0022079
• Description: Anolis carolinensis aca-miR-5453 mature miRNA
• Sequence: 54 - AUCCCCACUGCAGAAUGAAUG - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107