Stem-loop aca-mir-5448

Accession

MI0018951

Description

Anolis carolinensis aca-mir-5448 precursor miRNA

Sequence

cuauuuuuccacuacuGACAUGUCUUGUUAGUAUCUGAuuguugaguaaaaacagauacugacaagacacaaugguaguagaaaaaccu
...((((((.(((((((...(((((((((((((((((.((.........)).)))))))))))))))))...))))))).))))))...

Structure

cua      c       ACA                 A  guu 
   uuuuuc acuacuG   UGUCUUGUUAGUAUCUG uu   g
   |||||| |||||||   ||||||||||||||||| ||   a
   aaaaag ugauggu   acagaacagucauagac aa   g
ucc      a       aac                 a  aau 

Annotation confidence Not enough data

Genome context

chr4: 78345298-78345386 [-]

Mature aca-miR-5448

• Accession: MIMAT0022070
• Description: Anolis carolinensis aca-miR-5448 mature miRNA
• Sequence: 17 - GACAUGUCUUGUUAGUAUCUGA - 38
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107