miRBase entry: aca-mir-5447

Stem-loop aca-mir-5447


Accession
MI0018950
Description
Anolis carolinensis aca-mir-5447 precursor miRNA


Sequence

gacaucaacaguagauuuaccugccuccacaacauguauguaauauaauaccaugUUGUGGAUGCAGGAAGUCUACuguugguauc
((.(((((((((((((((.(((((.((((((((((((((........))).))))))))))).)))))))))))))))))))).))

Structure
  c               a     c           -   gua 
ga aucaacaguagauuu ccugc uccacaacaug uau   a
|| ||||||||||||||| ||||| ||||||||||| |||    
cu ugguuguCAUCUGAA GGACG AGGUGUUguac aua   u
  a               -     U           c   aua 


Annotation confidence Not enough data
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Genome context
chr4: 106532197-106532282 [+]

Database links

Mature aca-miR-5447

Accession MIMAT0022069
Description Anolis carolinensis aca-miR-5447 mature miRNA
Sequence 56 - UUGUGGAUGCAGGAAGUCUAC - 76
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107