Stem-loop aca-mir-5445

Accession

MI0018948

Description

Anolis carolinensis aca-mir-5445 precursor miRNA

Sequence

uaaugaaguaccuagaauucucugcuugagagcucuaguguaauuccucuaaccuaaguaCUAAGAGCUCUCUGGAAGAUAauuuuguguacugcaguaa
...((.(((((.(((((((.(((.((.(((((((((((((..................)))).))))))))).)).))).))))))).))))).))....

Structure

-uaa  a     c       c   g  u         -    uaauuccu 
    ug aguac uagaauu ucu cu gagagcucu agug        c
    || ||||| ||||||| ||| || ||||||||| ||||         
    ac ucaug guuuuaA AGA GG CUCUCGAGA UCau        u
aaug  g     u       U   A  U         A    gaauccaa 

Annotation confidence Not enough data

Genome context

GL343215.1: 1434404-1434503 [+]

Mature aca-miR-5445

• Accession: MIMAT0022067
• Description: Anolis carolinensis aca-miR-5445 mature miRNA
• Sequence: 61 - CUAAGAGCUCUCUGGAAGAUA - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107