Stem-loop aca-mir-5413

Accession

MI0018916

Description

Anolis carolinensis aca-mir-5413 precursor miRNA

Sequence

gaaacaugaucagaaaUAGUUUUACCAUUGCAUUGGAGauggaauuuuuucUAAUGCAACGGUAGAACUAUUccugaucauguagc
...((((((((((.((((((((((((.((((((((((((........)))))))))))).)))))))))))).))))))))))...

Structure

gaa          a            A            ugg 
   acaugaucag aaUAGUUUUACC UUGCAUUGGAGa   a
   |||||||||| |||||||||||| ||||||||||||    
   uguacuaguc UUAUCAAGAUGG AACGUAAUcuuu   a
cga          c            C            uuu 

Annotation confidence Not enough data

Genome context

GL343328.1: 362977-363062 [-]

Mature aca-miR-5413-5p

• Accession: MIMAT0022032
• Description: Anolis carolinensis aca-miR-5413-5p mature miRNA
• Sequence: 17 - UAGUUUUACCAUUGCAUUGGAG - 38
• Evidence: experimental ; Illumina [1]

Mature aca-miR-5413-3p

• Accession: MIMAT0022033
• Description: Anolis carolinensis aca-miR-5413-3p mature miRNA
• Sequence: 52 - UAAUGCAACGGUAGAACUAUU - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107