miRBase entry: aca-mir-5411

Stem-loop aca-mir-5411


Accession
MI0018914
Description
Anolis carolinensis aca-mir-5411 precursor miRNA


Sequence

caugccaguucuuucagcauagguuauuccaauauguauuuuaaaacauauaUUUGGAUAUCCUAUGCUUAGAGaauugguagg
..((((((((((((.((((((((.(((.(((((((((........))))))...)))))).)))))))).))))))))))))..

Structure
ca            c        u   u   ---      auu 
  ugccaguucuuu agcauagg uau cca   auaugu   u
  |||||||||||| |||||||| ||| |||   ||||||    
  augguuaaGAGA UCGUAUCC AUA GGU   uauaca   u
gg            U        U   -   UUa      aaa 


Annotation confidence Not enough data
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Genome context
GL343263.1: 162541-162624 [+]

Database links

Mature aca-miR-5411

Accession MIMAT0022029
Description Anolis carolinensis aca-miR-5411 mature miRNA
Sequence 53 - UUUGGAUAUCCUAUGCUUAGAG - 74
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107