Stem-loop aca-mir-5405

Accession

MI0018908

Description

Anolis carolinensis aca-mir-5405 precursor miRNA

Sequence

gugggcaauauUGUUUUAUUUGCCUUCCUGUUUagaaaucagcagaACAGGGAGACAUCUAGGACAAGguugccagg
...((((((.((((((((..((.((((((((((...........)))))))))).))..)))))))).))))))...

Structure

gug      a        UU  C          agaa 
   ggcaau uUGUUUUA  UG CUUCCUGUUU    a
   |||||| ||||||||  || ||||||||||    u
   ccguug AACAGGAU  AC GAGGGACAag    c
gga      G        CU  A          acga 

Annotation confidence Not enough data

Genome context

AAWZ02040084.1: 322-398 [+]

Mature aca-miR-5405-5p

• Accession: MIMAT0022018
• Description: Anolis carolinensis aca-miR-5405-5p mature miRNA
• Sequence: 12 - UGUUUUAUUUGCCUUCCUGUUU - 33
• Evidence: experimental ; Illumina [1]

Mature aca-miR-5405-3p

• Accession: MIMAT0022019
• Description: Anolis carolinensis aca-miR-5405-3p mature miRNA
• Sequence: 47 - ACAGGGAGACAUCUAGGACAAG - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107