Stem-loop aca-mir-5402

Accession

MI0018904

Description

Anolis carolinensis aca-mir-5402 precursor miRNA

Sequence

auaccuuugugaguuuUCUUCUCUUGGUCUACAGAUCcgauguuuaaccgUUCUGUAGCUCUUGGGACUGAAGAacuugcaaaggcac
...(((((((((((((((.((((..((.(((((((..((.........)).))))))).))..))))..).))))))))))))))...

Structure

aua              - -U    UU  U       UC  aug 
   ccuuugugaguuuU C  UCUC  GG CUACAGA  cg   u
   |||||||||||||| |  ||||  || |||||||  ||   u
   ggaaacguucaAGA G  AGGG  CU GAUGUCU  gc   u
cac              A UC    UU  C       -U  caa 

Annotation confidence Not enough data

Genome context

GL343894.1: 87874-87961 [+]

Mature aca-miR-5402-5p

• Accession: MIMAT0022012
• Description: Anolis carolinensis aca-miR-5402-5p mature miRNA
• Sequence: 17 - UCUUCUCUUGGUCUACAGAUC - 37
• Evidence: experimental ; Illumina [1]

Mature aca-miR-5402-3p

• Accession: MIMAT0022013
• Description: Anolis carolinensis aca-miR-5402-3p mature miRNA
• Sequence: 51 - UUCUGUAGCUCUUGGGACUGAAGA - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107