Stem-loop aca-mir-5401

Accession

MI0018903

Description

Anolis carolinensis aca-mir-5401 precursor miRNA

Sequence

gcggggcggccucugggccgaggaggcgccgccggagagccGUAUCUUCGCCGCGGUGCUGCUCUucucgugggccgucuacc
...(((((((((.((((..(((..((((((((((((((......))))))..)))))))).)))..)))).)))))))))...

Structure

gcg         c    cc   ga        --      gc 
   gggcggccu uggg  gag  ggcgccgc  cggaga  c
   ||||||||| ||||  |||  ||||||||  ||||||   
   ucugccggg gcuc  CUC  UCGUGGCG  GCUUCU  G
cca         u    uU   -G        CC      AU 

Annotation confidence Not enough data

Genome context

GL343276.1: 1792193-1792275 [+]

Mature aca-miR-5401

• Accession: MIMAT0022011
• Description: Anolis carolinensis aca-miR-5401 mature miRNA
• Sequence: 42 - GUAUCUUCGCCGCGGUGCUGCUCU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107