Stem-loop aca-mir-7-2

Accession

MI0018883

Description

Anolis carolinensis aca-mir-7-2 precursor miRNA

Gene family

MIPF0000022; mir-7

Sequence

uguuggccuaguucugugUGGAAGACUAGUGAUUUUGUUGUuuuuagauaacuaaauugaCAACAAAUCGCAGUCUACCAUauggcacaggccauaaccucu
...((((((.((.((((((((.(((((.(((((((.(((((((((((....)))))..)))))))))))))))))).)))))))).))))))))........

Structure

-----ugu      a  u        A     A       U      --     a 
        uggccu gu cugugUGG AGACU GUGAUUU GUUGUu  uuuag u
        |||||| || |||||||| ||||| ||||||| ||||||  |||||  
        accgga ca gguaUACC UCUGA CGCUAAA CAACag  aaauc a
ucuccaau      -  c        A     -       -      uu     a 

Annotation confidence Not enough data

Genome context

chr2: 42574641-42574742 [+]

Mature aca-miR-7-5p

• Accession: MIMAT0021983
• Description: Anolis carolinensis aca-miR-7-5p mature miRNA
• Sequence: 19 - UGGAAGACUAGUGAUUUUGUUGU - 41
• Evidence: experimental ; Illumina [1]

Mature aca-miR-7-2-3p

• Accession: MIMAT0021985
• Description: Anolis carolinensis aca-miR-7-2-3p mature miRNA
• Sequence: 61 - CAACAAAUCGCAGUCUACCAU - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107