Stem-loop aca-mir-490

Accession

MI0018878

Description

Anolis carolinensis aca-mir-490 precursor miRNA

Gene family

MIPF0000229; mir-490

Sequence

ugauauguucaugccucaacaCCAUGGAUCUCCAGGUGGGUcaagauuauagagaaacacCAACCUGGAGGACUCCAUGCUGUugagcuguucacaagc
.....((..((.((.((((((.(((((((((((((((.(((.................))).)))))))))..)))))).))))))))))..)).....

Structure

ugaua  uu  u  c      C      --         G   caagauu 
     ug  ca gc ucaaca CAUGGA  UCUCCAGGU GGU       a
     ||  || || |||||| ||||||  ||||||||| |||       u
     ac  gu cg aguUGU GUACCU  GGAGGUCCA Cca       a
cgaac  uu  -  -      C      CA         A   caaagag 

Annotation confidence Not enough data

Genome context

GL343419.1: 442466-442564 [-]

Mature aca-miR-490-5p

• Accession: MIMAT0021976
• Description: Anolis carolinensis aca-miR-490-5p mature miRNA
• Sequence: 22 - CCAUGGAUCUCCAGGUGGGU - 41
• Evidence: experimental ; Illumina [1]

Mature aca-miR-490-3p

• Accession: MIMAT0021977
• Description: Anolis carolinensis aca-miR-490-3p mature miRNA
• Sequence: 61 - CAACCUGGAGGACUCCAUGCUGU - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107