Stem-loop aca-mir-375

Accession

MI0018863

Description

Anolis carolinensis aca-mir-375 precursor miRNA

Gene family

MIPF0000114; mir-375

Sequence

cugggcuacugcugugcuugccucGCGUCGAGCCCCACGCACAAGAccugacgugaauguUUUGUUCGUUCGGCUCGCGUUAggcagguccagccuaucu
..........((((.((((((((.(((.((((((..(((.(((((((.(.......).))))))).)))..))))))))).)))))))).))))......

Structure

cugggcuacu    u        c   U      CC   C       c ga 
          gcug gcuugccu GCG CGAGCC  ACG ACAAGAc u  c
          |||| |||||||| ||| ||||||  ||| ||||||| |  g
          cgac uggacggA UGC GCUCGG  UGC UGUUUug a  u
----ucuauc    c        U   -      CU   U       u ag 

Annotation confidence Not enough data

Genome context

chr1: 87863736-87863835 [-]

Mature aca-miR-375-5p

• Accession: MIMAT0021950
• Description: Anolis carolinensis aca-miR-375-5p mature miRNA
• Sequence: 25 - GCGUCGAGCCCCACGCACAAGA - 46
• Evidence: experimental ; Illumina [1]

Mature aca-miR-375-3p

• Accession: MIMAT0021951
• Description: Anolis carolinensis aca-miR-375-3p mature miRNA
• Sequence: 61 - UUUGUUCGUUCGGCUCGCGUUA - 82
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107