miRBase entry: aca-mir-365

Stem-loop aca-mir-365


Accession
MI0018861
Description
Anolis carolinensis aca-mir-365 precursor miRNA
Gene family
MIPF0000061; mir-365


Sequence

aagaaaaaugAGGGACUUUCAGGGGCAGCUGUGuuuuacuaacccagucaUAAUGCCCCUAAAAAUCCUUAUuguucuu
(((((.((((((((..(((.(((((((((((.(((.....))).)))).....))))))).))).)))))))).)))))

Structure
     a        AC   C       -----    U   u 
aagaa aaugAGGG  UUU AGGGGCA     GCUG Guu u
||||| ||||||||  ||| |||||||     |||| ||| a
uucuu uUAUUCCU  AAA UCCCCGU     ugac caa c
     g        -A   A       AAUac    c   u 


Annotation confidence Not enough data
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Genome context
GL343198.1: 1087511-1087589 [+]

Database links

Mature aca-miR-365-5p

Accession MIMAT0021947
Description Anolis carolinensis aca-miR-365-5p mature miRNA
Sequence 11 - AGGGACUUUCAGGGGCAGCUGUG - 33
Evidence experimental
Illumina [1]

Mature aca-miR-365-3p

Accession MIMAT0021948
Description Anolis carolinensis aca-miR-365-3p mature miRNA
Sequence 51 - UAAUGCCCCUAAAAAUCCUUAU - 72
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107