Stem-loop aca-mir-204a-2

Accession

MI0018807

Description

Anolis carolinensis aca-mir-204a-2 precursor miRNA

Gene family

MIPF0000042; mir-204

Sequence

aguaccuauucaugugacccguggacUUCCCUUUGUCAUCCUAUGCCUgagaauauaugaaggggGCUGGGAAGGCAAAGGGACGUucaauugucauc
.............(((((...(((((.((((((((((.(((((.((((...............))))))))).)))))))))).)))))...))))).

Structure

aguaccuauucau     ccg     U          A     U    gagaau 
             gugac   uggac UCCCUUUGUC UCCUA GCCU      a
             |||||   ||||| |||||||||| ||||| ||||      u
             uacug   acuUG AGGGAAACGG AGGGU CGgg      a
------------c     uua     C          A     -    ggaagu 

Annotation confidence Not enough data

Genome context

chr2: 48871963-48872060 [+]

Mature aca-miR-204a-5p

• Accession: MIMAT0021853
• Description: Anolis carolinensis aca-miR-204a-5p mature miRNA
• Sequence: 27 - UUCCCUUUGUCAUCCUAUGCCU - 48
• Evidence: experimental ; Illumina [1]

Mature aca-miR-204a-3p

• Accession: MIMAT0021854
• Description: Anolis carolinensis aca-miR-204a-3p mature miRNA
• Sequence: 66 - GCUGGGAAGGCAAAGGGACGU - 86
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107