miRBase entry: aca-mir-194-2

Stem-loop aca-mir-194-2


Accession
MI0018790
Description
Anolis carolinensis aca-mir-194-2 precursor miRNA
Gene family
MIPF0000055; mir-194


Sequence

augguucccaucggcUGUAACAGCAACUCCAUGUGGAagcaguccggccguuCCAGUGGAGCGGCUGUUAUAGucggugggggcugc
..((((((((((((((((((((((..((((((.(((((((......))..)))))))))))..))))))))))))))))))))))..

Structure
au                      AA      G     --  ag 
  gguucccaucggcUGUAACAGC  CUCCAU UGGAa  gc  u
  ||||||||||||||||||||||  |||||| |||||  ||   
  ucggggguggcuGAUAUUGUCG  GAGGUG ACCuu  cg  c
cg                      GC      -     gc  gc 


Annotation confidence Not enough data
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Genome context
GL343545.1: 154408-154494 [-]

Database links

Mature aca-miR-194-5p

Accession MIMAT0021828
Description Anolis carolinensis aca-miR-194-5p mature miRNA
Sequence 16 - UGUAACAGCAACUCCAUGUGGA - 37
Evidence experimental
Illumina [1]

Mature aca-miR-194-2-3p

Accession MIMAT0021830
Description Anolis carolinensis aca-miR-194-2-3p mature miRNA
Sequence 53 - CCAGUGGAGCGGCUGUUAUAG - 73
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107