Stem-loop aca-mir-193

Accession

MI0018788

Description

Anolis carolinensis aca-mir-193 precursor miRNA

Gene family

MIPF0000082; mir-193

Sequence

aguuuccuugggggucugggccUGGGUCUUUGCGGGCGAGAUGagaaguuuccugccuucAACUGGCCUACAAAGUCCCAguccucggccccugacuu
.......(((((((((.(((.(((((.(((((.((((.((.((((..((.....)).)))).)).)))).))))).))))).))).)))))))))...

Structure

aguuucc         u   c     U     C    G  A    aa  u 
       uuggggguc ggg cUGGG CUUUG GGGC AG UGag  gu u
       ||||||||| ||| ||||| ||||| |||| || ||||  || c
       aguccccgg ucc gACCC GAAAC UCCG UC Acuu  cg c
----uuc         c   u     U     A    G  A    -c  u 

Annotation confidence Not enough data

Genome context

GL343198.1: 1030731-1030828 [+]

Mature aca-miR-193-5p

• Accession: MIMAT0021826
• Description: Anolis carolinensis aca-miR-193-5p mature miRNA
• Sequence: 23 - UGGGUCUUUGCGGGCGAGAUG - 43
• Evidence: experimental ; Illumina [1]

Mature aca-miR-193-3p

• Accession: MIMAT0021827
• Description: Anolis carolinensis aca-miR-193-3p mature miRNA
• Sequence: 61 - AACUGGCCUACAAAGUCCCA - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107