Stem-loop aca-mir-190b

Accession

MI0018786

Description

Anolis carolinensis aca-mir-190b precursor miRNA

Gene family

MIPF0000076; mir-190

Sequence

ccucccccugcuucugcUGAUAUGUUUGAUAUUAGGUUGuucuacugggaaaccaacuaaauaucaaacauauucuuacagcgccagggccc
.....(((((....(((((((((((((((((((.(((((((((....))))..))))).)))))))))))))).....))))).)))))...

Structure

ccucc     cuuc     -----              A     --    a 
     cccug    ugcUG     AUAUGUUUGAUAUU GGUUG  uucu c
     |||||    |||||     |||||||||||||| |||||  ||||  
     gggac    gcgac     uauacaaacuauaa ucaac  aagg u
--ccc     ---c     auucu              a     ca    g 

Annotation confidence Not enough data

Genome context

Unknown

Mature aca-miR-190b

• Accession: MIMAT0021823
• Description: Anolis carolinensis aca-miR-190b mature miRNA
• Sequence: 18 - UGAUAUGUUUGAUAUUAGGUUG - 39
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107