Stem-loop aca-mir-190a

Accession

MI0018785

Description

Anolis carolinensis aca-mir-190a precursor miRNA

Gene family

MIPF0000076; mir-190

Sequence

uuuccugcagggcucugugUGAUAUGUUUGAUAUAUUAGGUUguaauugagcccaACUAUAUAUCAAACAUUCCUacagggccccgcucugucuccag
......((.((((((((((.((.(((((((((((((..(((((..........)))))))))))))))))))).)))))))))).))...........

Structure

-----uuuccu  a          U  U             UA     uaau 
           gc gggcucugug GA AUGUUUGAUAUAU  GGUUg    u
           || |||||||||| || |||||||||||||  |||||     
           cg cccgggacaU CU UACAAACUAUAUA  UCAac    g
gaccucugucu  c          C  -             --     ccga 

Annotation confidence Not enough data

Genome context

GL344433.1: 25387-25484 [+]

Mature aca-miR-190a-5p

• Accession: MIMAT0021821
• Description: Anolis carolinensis aca-miR-190a-5p mature miRNA
• Sequence: 20 - UGAUAUGUUUGAUAUAUUAGGUU - 42
• Evidence: experimental ; Illumina [1]

Mature aca-miR-190a-3p

• Accession: MIMAT0021822
• Description: Anolis carolinensis aca-miR-190a-3p mature miRNA
• Sequence: 56 - ACUAUAUAUCAAACAUUCCU - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107