Stem-loop aca-mir-1677a

Accession

MI0018768

Description

Anolis carolinensis aca-mir-1677a precursor miRNA

Gene family

MIPF0000849; mir-1677

Sequence

ugguauaaaguguuaauccuccccuauugaaaucaaugggaugccugccacUGACUUCAAUAGGAGUAGGAUGacacuauaugaug
...((((.(((((((.(((((.(((((((((.(((.(((........))).))).))))))))).).))))))))))).))))...

Structure

ugg    a       a    - c         a   a   gau 
   uaua aguguua uccu c ccuauugaa uca ugg   g
   |||| ||||||| |||| | ||||||||| ||| |||    
   guau ucacaGU AGGA G GGAUAACUU AGU acc   c
gua    a       -    U A         C   c   guc 

Annotation confidence Not enough data

Genome context

chr5: 15152936-15153021 [+]

Mature aca-miR-1677a

• Accession: MIMAT0021796
• Description: Anolis carolinensis aca-miR-1677a mature miRNA
• Sequence: 52 - UGACUUCAAUAGGAGUAGGAUG - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107