Stem-loop aca-mir-155

Accession

MI0018764

Description

Anolis carolinensis aca-mir-155 precursor miRNA

Gene family

MIPF0000157; mir-155

Sequence

cacacguugUUAAUGCUAAUCGUGAUAGGGGuuuuuaucucugacugaCUCCUACAUGUUAGCAUUAAGaauguguagug
.(((((((.((((((((((.((((.((((((((.............)))))))))))))))))))))).)))))))....

Structure

---c       g          U    A        uuuau 
    acacguu UUAAUGCUAA CGUG UAGGGGuu     c
    ||||||| |||||||||| |||| ||||||||     u
    uguguaa AAUUACGAUU GUAC AUCCUCag     c
guga       G          -    -        ucagu 

Annotation confidence Not enough data

Genome context

chr3: 148357592-148357671 [-]

Mature aca-miR-155-5p

• Accession: MIMAT0021788
• Description: Anolis carolinensis aca-miR-155-5p mature miRNA
• Sequence: 10 - UUAAUGCUAAUCGUGAUAGGGG - 31
• Evidence: experimental ; Illumina [1]

Mature aca-miR-155-3p

• Accession: MIMAT0021789
• Description: Anolis carolinensis aca-miR-155-3p mature miRNA
• Sequence: 49 - CUCCUACAUGUUAGCAUUAAG - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107