Stem-loop aca-mir-148b

Accession

MI0018760

Description

Anolis carolinensis aca-mir-148b precursor miRNA

Gene family

MIPF0000056; mir-148

Sequence

aguuaaugcagcgcuugagguGAAGUUCUGUUAUACACUCUGacuguggcuauguggaagUCAGUGCAUCACAGAACUUUGUcucgagagcuugcca
.......(((((.((((((((((((((((((.((.((((..((((.(.((...)).).)))))))).)).)))))))))))))))))).)).)))..

Structure

aguuaau   -  g                  U  A    CU    g g  u 
       gca gc cuugagguGAAGUUCUGU AU CACU  Gacu u gc  
       ||| || |||||||||||||||||| || ||||  |||| | || a
       cgu cg gagcucUGUUUCAAGACA UA GUGA  CUga g ug  
-----ac   u  a                  C  C    --    a g  u 

Annotation confidence Not enough data

Genome context

chr2: 71202707-71202803 [-]

Mature aca-miR-148b-5p

• Accession: MIMAT0021782
• Description: Anolis carolinensis aca-miR-148b-5p mature miRNA
• Sequence: 22 - GAAGUUCUGUUAUACACUCUG - 42
• Evidence: experimental ; Illumina [1]

Mature aca-miR-148b-3p

• Accession: MIMAT0021783
• Description: Anolis carolinensis aca-miR-148b-3p mature miRNA
• Sequence: 61 - UCAGUGCAUCACAGAACUUUGU - 82
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107