miRBase entry: aca-mir-144

Stem-loop aca-mir-144


Accession
MI0018754
Description
Anolis carolinensis aca-mir-144 precursor miRNA
Gene family
MIPF0000093; mir-144


Sequence

cgaagucucugggccGGAUAUCAUCAUAUACUGUAAguuggaaugagacacUACAGUAUAGAUGAUGUACUaccuucaccuaaauucu
.(((......(((....((((((((.(((((((((.((.(........))))))))))))))))))))....))).........))).

Structure
c   ---gucucu   ccGG        A         A  u gaa 
 gaa         ggg    AUAUCAUC UAUACUGUA gu g   u
 |||         |||    |||||||| ||||||||| || |    
 cuu         ucc    UGUAGUAG AUAUGACAU ca c   g
u   aaauccacu   aUCA        -         -  - aga 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature aca-miR-144-5p

Accession MIMAT0021771
Description Anolis carolinensis aca-miR-144-5p mature miRNA
Sequence 16 - GGAUAUCAUCAUAUACUGUAA - 36
Evidence experimental
Illumina [1]

Mature aca-miR-144-3p

Accession MIMAT0021772
Description Anolis carolinensis aca-miR-144-3p mature miRNA
Sequence 52 - UACAGUAUAGAUGAUGUACU - 71
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107