Stem-loop aca-mir-1397

Accession

MI0018750

Description

Anolis carolinensis aca-mir-1397 precursor miRNA

Gene family

MIPF0000642; mir-1397

Sequence

cugugaugugugcauUGCAUUGCGAUGGGUUACAUCAcuggucauagcaugauguaacccaacgcagcaugguguaagcaucguaa
.((((((((.((((((((..((((.((((((((((((.((.......)))))))))))))).)))))))..))))).)))))))).

Structure

c        g     --   AU    A            c  gu 
 ugugaugu ugcau  UGC  UGCG UGGGUUACAUCA ug  c
 |||||||| |||||  |||  |||| |||||||||||| ||  a
 augcuacg augug  acg  acgc acccaauguagu ac  u
a        a     gu   --    a            -  ga 

Annotation confidence Not enough data

Genome context

chr3: 116429076-116429161 [-]

Mature aca-miR-1397

• Accession: MIMAT0021764
• Description: Anolis carolinensis aca-miR-1397 mature miRNA
• Sequence: 16 - UGCAUUGCGAUGGGUUACAUCA - 37
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107