Stem-loop aca-mir-126

Accession

MI0018727

Description

Anolis carolinensis aca-mir-126 precursor miRNA

Gene family

MIPF0000115; mir-126

Sequence

cgcuccccgcggucCAUUAUUACUUUUGGUACGCGcugugccacuucaaacUCGUACCGUGAGUAAUAAUGCGcugagggacagcaccc
.(((.(((.((((.(((((((((((.(((((((.(.((........))..).))))))).))))))))))).)))).)))..)))....

Structure

---c   -c   g    c           U       C -c  ugc 
    gcu  ccc cggu CAUUAUUACUU UGGUACG G  ug   c
    |||  ||| |||| ||||||||||| ||||||| |  ||    
    cga  ggg gucG GUAAUAAUGAG GCCAUGC c  ac   a
ccca   ca   a    C           U       U aa  uuc 

Annotation confidence Not enough data

Genome context

GL344924.1: 6921-7009 [-]

Mature aca-miR-126-5p

• Accession: MIMAT0021730
• Description: Anolis carolinensis aca-miR-126-5p mature miRNA
• Sequence: 15 - CAUUAUUACUUUUGGUACGCG - 35
• Evidence: experimental ; Illumina [1]

Mature aca-miR-126-3p

• Accession: MIMAT0021731
• Description: Anolis carolinensis aca-miR-126-3p mature miRNA
• Sequence: 52 - UCGUACCGUGAGUAAUAAUGCG - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107