miRBase entry: aca-mir-124a-1

Stem-loop aca-mir-124a-1


Accession
MI0018720
Description
Anolis carolinensis aca-mir-124a-1 precursor miRNA
Gene family
MIPF0000021; mir-124

Literature search
1 open access papers mention aca-mir-124a-1
(2 sentences)

Sequence

gcgggaccggaggcgcugccucuccguguucacagcggaccuugauuuaaugucauacaauUAAGGCACGCGGUGAAUGCCAagagcggggcuggaag
......((...(((.((((.(((..((((((((.(((..((((((((...........))))))))..))).))))))))..))))))).)))))...

Structure
gcggga  gga   g    c   cc        a   ga        uaau 
      cc   ggc cugc ucu  guguucac gcg  ccuugauu    g
      ||   ||| |||| |||  |||||||| |||  ||||||||    u
      gg   ucg ggcg aga  CGUAAGUG CGC  GGAAUuaa    c
---gaa  ---   g    -   AC        G   AC        caua 


Annotation confidence Not enough data
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Genome context
chr4: 29946081-29946178 [+]

Database links

Mature aca-miR-124a

Accession MIMAT0021725
Description Anolis carolinensis aca-miR-124a mature miRNA
Sequence 62 - UAAGGCACGCGGUGAAUGCCA - 82
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107