Stem-loop sequence aca-mir-124a-1

Accession

MI0018720 (change log)

Description

Anolis carolinensis miR-124a-1 stem-loop

Gene family

MIPF0000021; mir-124

Literature search

1 open access papers mention aca-mir-124a-1
(2 sentences)

Stem-loop

   gcgggaccgga   g    c   cc        a   ga        uaau 
5'            ggc cugc ucu  guguucac gcg  ccuugauu    g
              ||| |||| |||  |||||||| |||  ||||||||    u
3'            ucg ggcg aga  cguaagug cgc  ggaauuaa    c
   ------gaagg   g    -   ac        g   ac        caua 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (AnoCar2.0; GCA_000090745.2): chr4: 29946081-29946178 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0018720

Mature sequence aca-miR-124a

• Accession: MIMAT0021725
• Sequence: 62 - uaaggcacgcggugaaugcca - 82
• Evidence: experimental; Illumina [1]

References

1. PMID:21775315 "MicroRNAs support a turtle + lizard clade" Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ Biol Lett. 8:104-107(2012).