miRBase entry: aca-mir-122

Stem-loop aca-mir-122


Accession
MI0018719
Description
Anolis carolinensis aca-mir-122 precursor miRNA
Gene family
MIPF0000095; mir-122


Sequence

uccugcuggagcugUGGAGUGUGACAAUGGUGUUUGuauccaauccgucaAACGCCAUUAUCACACUAAAUAgcuacugcuagag
((..((...((((((..(((((((.(((((((((((............))))))))))).)))))))..))))))...))..)).

Structure
-  cu  ugg      GG       C           uaucc 
 uc  gc   agcugU  AGUGUGA AAUGGUGUUUG     a
 ||  ||   ||||||  ||||||| |||||||||||      
 ag  cg   ucgAUA  UCACACU UUACCGCAAac     a
g  au  uca      AA       A           ugccu 


Annotation confidence Not enough data
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Genome context
GL343213.1: 2690944-2691028 [+]

Database links

Mature aca-miR-122-5p

Accession MIMAT0021723
Description Anolis carolinensis aca-miR-122-5p mature miRNA
Sequence 15 - UGGAGUGUGACAAUGGUGUUUG - 36
Evidence experimental
Illumina [1]

Mature aca-miR-122-3p

Accession MIMAT0021724
Description Anolis carolinensis aca-miR-122-3p mature miRNA
Sequence 51 - AACGCCAUUAUCACACUAAAUA - 72
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107