miRBase entry: aca-mir-103

Stem-loop aca-mir-103


Accession
MI0018715
Description
Anolis carolinensis aca-mir-103 precursor miRNA
Gene family
MIPF0000024; mir-103


Sequence

uauuucucgcugccuucAGCUUCUUUACAGUGCUGCCUuguugcuuauggaucaAGCAGCAUUGUACAGGGCUAUGaaggcauugaguacugcuuca
.....((((.(((((((((((.((.(((((((((((.(((.(.(....).).)))))))))))))).)))))..)))))))).))))..........

Structure
-----uauuu    c        --   U  U           C   u g u 
          cucg ugccuucA  GCU CU UACAGUGCUGC Uug u c u
          |||| ||||||||  ||| || ||||||||||| ||| | |  
          gagu acggaaGU  CGG GA AUGUUACGACG Aac a g a
acuucgucau    u        AU   -  C           -   u g u 


Annotation confidence Not enough data
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Genome context
chr2: 189292145-189292241 [+]

Database links

Mature aca-miR-103-5p

Accession MIMAT0021715
Description Anolis carolinensis aca-miR-103-5p mature miRNA
Sequence 18 - AGCUUCUUUACAGUGCUGCCU - 38
Evidence experimental
Illumina [1]

Mature aca-miR-103-3p

Accession MIMAT0021716
Description Anolis carolinensis aca-miR-103-3p mature miRNA
Sequence 55 - AGCAGCAUUGUACAGGGCUAUG - 76
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107