miRBase entry: aca-mir-101-1

Stem-loop aca-mir-101-1


Accession
MI0018712
Description
Anolis carolinensis aca-mir-101-1 precursor miRNA
Gene family
MIPF0000046; mir-101


Sequence

gcugcccuggcUCAGUUAUCACUGUGCUGAUGCugucuauacuaaaggUACAGUACUGUGAUAACUGAaggauggcagc
((((((.....(((((((((((.((((((.((((............)))))))))).))))))))))).....))))))

Structure
      cuggc           U      A    gucua 
gcugcc     UCAGUUAUCAC GUGCUG UGCu     u
||||||     ||||||||||| |||||| ||||      
cgacgg     AGUCAAUAGUG CAUGAC AUgg     a
      uagga           U      -    aaauc 


Annotation confidence Not enough data
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Genome context
chr4: 98411443-98411521 [+]

Database links

Mature aca-miR-101-1-5p

Accession MIMAT0021710
Description Anolis carolinensis aca-miR-101-1-5p mature miRNA
Sequence 12 - UCAGUUAUCACUGUGCUGAUGC - 33
Evidence experimental
Illumina [1]

Mature aca-miR-101-3p

Accession MIMAT0021711
Description Anolis carolinensis aca-miR-101-3p mature miRNA
Sequence 49 - UACAGUACUGUGAUAACUGA - 68
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107