miRBase entry: aca-mir-5391

Stem-loop aca-mir-5391


Accession
MI0018698
Description
Anolis carolinensis aca-mir-5391 precursor miRNA
Gene family
MIPF0001944; mir-5391


Sequence

uaacacUGGACAGUUAUGAAGAGGCAgguguucagguaaccccuguuucuucuccuguuccaguggug
...((((((((((....(((((((((((.(((.....))).)))))))))))..))).)))))))...

Structure
uaa       -   UUAU           u   c 
   cacUGGA CAG    GAAGAGGCAgg guu a
   ||||||| |||    ||||||||||| ||| g
   gugaccu guc    cuucuuugucc caa g
gug       u   --cu           c   u 


Annotation confidence Not enough data
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Genome context
chr3: 50528427-50528494 [-]

Database links

Mature aca-miR-5391

Accession MIMAT0021689
Description Anolis carolinensis aca-miR-5391 mature miRNA
Sequence 7 - UGGACAGUUAUGAAGAGGCA - 26
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107