Stem-loop gma-MIR5375

Accession

MI0018634

Description

Glycine max gma-MIR5375 precursor miRNA

Sequence

guauuuagcaaauugauuACUAUAGAAGUACUUGUGGAGCucuugugcaacucuccuuuccaucuuggggcaguuucucagaaucaauauucuuaugaugggaaucugaauucacaguuuuuguaacugcaaaaacuugugagguuugauagcuccacaaguaaaucuauaguaauuaauuugcuaaauac
((((((((((((((((((((((((((..(((((((((((((.(((.((((((((((..........)))).))))..(((((.((.....((....))...)).))))).((((((((((((((....)))))))).)))))))).))).)))))))))))))..))))))))))))))))))))))))))

Structure

                          AG             c   u  aacucuccuuuccaucuuggggcaguuucucagaaucaauauucuuaugaugggaaucugaa      -        a 
guauuuagcaaauugauuACUAUAGA  UACUUGUGGAGCu uug gc                                                              uucaca guuuuugu a
||||||||||||||||||||||||||  ||||||||||||| ||| ||                                                              |||||| ||||||||  
cauaaaucguuuaauuaaugauaucu  augaacaccucga agu ug                                                              gagugu caaaaacg c
                          aa             u   u  --------------------------------------------------------------      u        u 

Annotation confidence Not enough data

Genome context

chr16: 2942348-2942538 [+]

Mature gma-miR5375

• Accession: MIMAT0021616
• Description: Glycine max gma-miR5375 mature miRNA
• Sequence: 19 - ACUAUAGAAGUACUUGUGGAGC - 40
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21663675
   Identification of novel soybean microRNAs involved in abiotic and biotic stresses
   Kulcheski FR, de Oliveira LF, Molina LG, Almerão MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimarães FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R
   BMC Genomics (2011) 12:307