Stem-loop sequence gma-MIR5371

Accession

MI0018627 (change log)

Description

Glycine max miR5371 stem-loop

Literature search

1 open access papers mention gma-MIR5371
(1 sentences)

Stem-loop

         c                                c          c      guucuuucauugagauccaugguugagucuacucguuccaagccuaauaugga 
5' gggagg cccuaguccucgaauucuaggaauuagucacu agauccuaac ucuuug                                                     c
   |||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||                                                     u
3' cccucc gggaucaggaguuuaagaucuuuaaucaguga ucuaggauug agaaac                                                     g
         a                                c          u      gucgcuacuccaacucaacuaaccuccauucaaagcgcuaccggagaagcuac 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Glycine_max_v2.0; GCA_000004515.3): chr15: 34072242-34072464 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0018627

Mature sequence gma-miR5371-5p

• Accession: MIMAT0021608
• Sequence: 25 - uaggaauuagucacucagauc - 45
• Evidence: experimental; Illumina [1]

Mature sequence gma-miR5371-3p

• Accession: MIMAT0021609
• Sequence: 181 - ucucagugacuaauuucuaga - 201
• Evidence: experimental; Illumina [1]

References

1. PMID:21663675 "Identification of novel soybean microRNAs involved in abiotic and biotic stresses" Kulcheski FR, de Oliveira LF, Molina LG, Almerao MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimaraes FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R BMC Genomics. 12:307(2011).