Stem-loop sequence asu-mir-993

Accession

MI0018585 (change log)

Description

Ascaris suum miR-993 stem-loop

Stem-loop

   -c   u     ac        ag  u      cugcac 
5'   gga gguuu  ccuguaga  cg guuuau      a
     ||| |||||  ||||||||  || ||||||       
3'   ccu ccagg  ggacaucu  gc cgaaua      u
   ga   u     ac        cu  u      aaacuu 

Confidence

Annotation confidence: not enough data

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Database links

• miRBase Tracker:MI0018585

Mature sequence asu-miR-993-5p

• Accession: MIMAT0021531
• Previous IDs: asu-miR-993*
• Sequence: 11 - acccuguagaagcguguuuauc - 32
• Evidence: experimental; Illumina [1]

Mature sequence asu-miR-993-3p

• Accession: MIMAT0021532
• Previous IDs: asu-miR-993
• Sequence: 47 - uaagcucgucucuacaggcagg - 68
• Evidence: experimental; Illumina [1]

References

1. PMID:21685128 "Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles" Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE Genome Res. 21:1462-1477(2011).