Stem-loop mtr-MIR5298c

Accession

MI0018474

Description

Medicago truncatula mtr-MIR5298c precursor miRNA

Gene family

MIPF0001286; MIR5298

Sequence

cauuagguuuucuucauuuucugaaauuuuucucggaauuuuguuguugaauguUGAUGGAGAUGAUAUGAAGAUGAAgaagaugauaag
......(((((((((((((((....((((((.((((.((((.......)))).)))).)))))).....)))))))))))))))......

Structure

cauuag               -ugaa      c    a    ug 
      guuuucuucauuuuc     auuuuu ucgg auuu  u
      |||||||||||||||     |||||| |||| ||||  u
      uagaagAAGUAGAAG     UAGAGG AGUu uaag  g
gaauag               UAUAG      U    g    uu 

Annotation confidence Not enough data

Genome context

chr7: 29221883-29221972 [-]

Mature mtr-miR5298c

• Accession: MIMAT0021371
• Description: Medicago truncatula mtr-miR5298c mature miRNA
• Sequence: 55 - UGAUGGAGAUGAUAUGAAGAUGAA - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010