miRBase entry: mtr-MIR5297

Stem-loop mtr-MIR5297


Accession
MI0018471
Description
Medicago truncatula mtr-MIR5297 precursor miRNA


Sequence

aaugcaggauaauuaucggauacuauccugaugcguAUCGGGAAGUAUCGGAUAAUUAUUuuuuaaa
.....((((((((((((.((((((.(((((((....))))))))))))).)))))))))))).....

Structure
aaugc            g      a       g 
     aggauaauuauc gauacu uccugau c
     |||||||||||| |||||| |||||||  
     uuUUAUUAAUAG CUAUGA AGGGCUA g
aaauu            G      -       u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr3: 43024293-43024359 [+]

Database links

Mature mtr-miR5297

Accession MIMAT0021368
Description Medicago truncatula mtr-miR5297 mature miRNA
Sequence 37 - AUCGGGAAGUAUCGGAUAAUUAUU - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010