Stem-loop mtr-MIR5293

Accession

MI0018462

Description

Medicago truncatula mtr-MIR5293 precursor miRNA

Sequence

gguugaaaauGAUGAAGAAGUGGAAGGAAGAAGAagaaaugaaaacaagguuuuuaauuugaaauuuuguuaauccuuguuuuugaauuucuucccucuauaagaggcaucaugucagcca
((((((..((((((.....(((((.((((((((.......((((((((((...(((((..........))))).))))))))))...)))))))).)))))......)))))).)))))).

Structure

-      aa      -AAGAA     A        Aagaaau          uuu     uuga 
 gguuga  auGAUG      GUGGA GGAAGAAG       gaaaacaagg   uuaau    a
 ||||||  ||||||      ||||| ||||||||       ||||||||||   |||||     
 ccgacu  uacuac      uaucu ccuucuuu       uuuuuguucc   aauug    a
a      -g      ggagaa     c        ----aag          --u     uuuu 

Annotation confidence Not enough data

Genome context

chr2: 7887544-7887664 [-]

Mature mtr-miR5293

• Accession: MIMAT0021359
• Description: Medicago truncatula mtr-miR5293 mature miRNA
• Sequence: 11 - GAUGAAGAAGUGGAAGGAAGAAGA - 34
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010