miRBase entry: mtr-MIR5289b

Stem-loop mtr-MIR5289b


Accession
MI0018454
Description
Medicago truncatula mtr-MIR5289b precursor miRNA
Gene family
MIPF0001850; MIR5289


Sequence

uuaacuccCGAGGAAAACUGAAAACUUCGGCAguuaacugccgaaguuuucaguuuacugucgaaguuuu
..((((..(((((.(((((((((((((((((((....))))))))))))))))))).)).))).))))..

Structure
uu    cc   -  A                   u 
  aacu  CGA GG AAACUGAAAACUUCGGCAg u
  ||||  ||| || |||||||||||||||||||  
  uuga  gcu uc uuugacuuuugaagccguc a
uu    -a   g  a                   a 


Annotation confidence Not enough data
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Genome context
chr7: 30397575-30397644 [-]

Database links

Mature mtr-miR5289b

Accession MIMAT0021351
Description Medicago truncatula mtr-miR5289b mature miRNA
Sequence 9 - CGAGGAAAACUGAAAACUUCGGCA - 32
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010