miRBase entry: mtr-MIR5284d

Stem-loop mtr-MIR5284d


Accession
MI0018441
Description
Medicago truncatula mtr-MIR5284d precursor miRNA
Gene family
MIPF0001277; MIR5284


Sequence

ccauguaauuucauauuccuccacuuuuggucccucauuuuacgugccauguaugcagauucugcugacgugguggaauGAGGGACCAAAAGUGGAAGAAUCUgacauuacaggg
((.((((((.(((.((((.((((((((((((((((((((((....(((((((..((((...))))..))))))))))))))))))))))))))))).)))).))).)))))))).

Structure
-  a      u   u    c                      acgu       au    a 
 cc uguaau uca auuc uccacuuuuggucccucauuuu    gccaugu  gcag  
 || |||||| ||| |||| ||||||||||||||||||||||    |||||||  |||| u
 gg acauua agU UAAG AGGUGAAAACCAGGGAGuaagg    uggugca  cguc  
g  -      c   C    A                      ----       gu    u 


Annotation confidence Not enough data
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Genome context
chr4: 6702508-6702622 [+]

Database links

Mature mtr-miR5284d

Accession MIMAT0021338
Description Medicago truncatula mtr-miR5284d mature miRNA
Sequence 80 - GAGGGACCAAAAGUGGAAGAAUCU - 103
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010