Stem-loop sequence mtr-MIR5281e

AccessionMI0018427 (change log)
DescriptionMedicago truncatula miR5281e stem-loop
Gene family MIPF0000382; MIR1122
Stem-loop 
   -ccaagcaaua       g                     u   uu       aaag   --a  uaucuag 
5'            uacuccc ccgguccuauuuauaagagaa uuu  gucaaca    uug   ug       u
              ||||||| ||||||||||||||||||||| |||  |||||||    |||   ||        
3'            augaggg ggccaggauaaauauucucuu aaa  caguugu    aac   ac       u
   caauacacuuc       a                     c   uc       caua   cug  uuaaaaa
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (JCVI_Mt3.5.2) Overlapping transcripts
chr6: 21484129-21484271 [+]
intergenic
Clustered miRNAs
< 10kb from mtr-MIR5281e
mtr-MIR399nchr6: 21480330-21480429 [-]
mtr-MIR5281echr6: 21484129-21484271 [+]
Database links

Mature sequence mtr-miR5281e

Accession MIMAT0021324
Sequence

107 -  

ucuuauaaauaggaccggagggag

 - 130

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Evidence experimental; Illumina [1]

References

1
PMID:21571671 "Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis" Devers EA, Branscheid A, May P, Krajinski F Plant Physiol. 156:1990-2010(2011).