Stem-loop mtr-MIR5279

Accession

MI0018421

Description

Medicago truncatula mtr-MIR5279 precursor miRNA

Sequence

ugaauCGGAACCACUCGGAUGACUCGGUUagauaacucgauccuuagauuaaauuuauauaguuauuuaaccggauuaacucggugacucggccacu
.....(.((..((((.((.(((.((((((((((((((.((((....))))..........)))))))))))))).))).)).))))..)).).....

Structure

ugaau G  AC    C  A   C              ---------c    c 
     C GA  CACU GG UGA UCGGUUagauaacu          gauc u
     | ||  |||| || ||| ||||||||||||||          ||||  
     g cu  gugg uc auu ggccaauuuauuga          uuag u
ucacc g  ca    c  a   a              uauauuuaaa    a 

Annotation confidence Not enough data

Genome context

chr8: 16702769-16702865 [-]

Mature mtr-miR5279

• Accession: MIMAT0021318
• Description: Medicago truncatula mtr-miR5279 mature miRNA
• Sequence: 6 - CGGAACCACUCGGAUGACUCGGUU - 29
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010