miRBase entry: mtr-MIR5278

Stem-loop mtr-MIR5278


Accession
MI0018420
Description
Medicago truncatula mtr-MIR5278 precursor miRNA


Sequence

cugcaggaaacacauuuccugcagauuuugccaaggguuuagguuccacaggaaagauauauccguagaaaauauGAAAUUAUCUGCAGGAAAUGUGAAauuauccgca
.(((.(((..(((((((((((((((((((((...((((.((..((((...))))...)).)))))))))............))))))))))))))))......))))))

Structure
c   a   ----aa                ------------     caa    u  -gg    a 
 ugc gga      cacauuuccugcagau            uuugc   gggu ua   uucc  
 ||| |||      ||||||||||||||||            |||||   |||| ||   |||| c
 acg ccu      GUGUAAAGGACGUCUA            agaug   ccua au   aagg  
-   -   auuaAA                UUAAAGuauaaa     ---    u  aga    a 


Annotation confidence Not enough data
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Genome context
chr6: 22025281-22025389 [-]

Database links

Mature mtr-miR5278

Accession MIMAT0021317
Description Medicago truncatula mtr-miR5278 mature miRNA
Sequence 76 - GAAAUUAUCUGCAGGAAAUGUGAA - 99
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010